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The study determined the extent of implementation of e-procurement program in selected State Universities and Colleges (SUCs) in Region III, Philippines namely four (4) state universities: Ramon Magsaysay Technological University, Bulacan State University Tarlac State University, Nueva Ecija University of Science and Technology and four (4) state colleges: Pampanga Agricultural College, Tarlac College of Agriculture, Bulacan Agriculture State College and Aurora State College of Technology. Two groups of stakeholders, (1) the procuring entity and (2) end-users, were the respondents for a total of 166 respondents. Results showed that perceptions of procuring entity and end-users differ on the implementation of e-procurement program in terms of receipt and opening of bids, bid evaluation, post-qualification, procurement of goods and supplies and alternative methods of procurement. However, both of the respondents agree on the awards and contract signing, implementation of infrastructure project and termination of contracts. From these results, stakeholders should implement seminars and trainings to enhance awareness of the provisions of government Procurement reform Act and must conform to its provisions to ensure transparency and accountability in government transactions and enhance efficiency and effectiveness in the procurement of goods, services and civil works. All government procuring entities are mandated to use the PhilGEPS in its procurement activities and shall post all opportunities, notices, awards and contracts in it as the central portal of government procurement transactions in accordance with RA 9184 and its IRR.